EnhancerDB
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  3. rs116392982[chr1:9516961]
Enhancers that have rs116392982[chr1:9516961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116392982[chr1:9516961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9516955 9516965 TBR1 JASPAR yes 26653317
chr1 9516956 9516966 TBX21 JASPAR yes 26653318
chr1 9516957 9516965 MGA JASPAR yes 26653319
chr1 9516957 9516965 TBX15 JASPAR yes 26653320
chr1 9516957 9516965 TBX1 JASPAR yes 26653321
chr1 9516957 9516965 TBX4 JASPAR yes 26653322
chr1 9516957 9516965 TBX5 JASPAR yes 26653323
chr1 9516957 9516966 ZEB1 JASPAR yes 26653324
chr1 9516957 9516970 ZBTB18 JASPAR yes 26653325
chr1 9516958 9516968 FIGLA JASPAR yes 26653326
chr1 9516958 9516968 ID4 JASPAR yes 26653327
chr1 9516958 9516968 TCF3 JASPAR yes 26653328
chr1 9516958 9516968 TCF4 JASPAR yes 26653329
chr1 9516960 9516965 USF2 TRANSFAC yes 26653330
Genes associated with rs116392982[chr1:9516961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More