EnhancerDB
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  3. rs116410174[chr12:52610874]
Enhancers that have rs116410174[chr12:52610874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116410174[chr12:52610874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52610426 52611030 TCF7L2 GTRD no Colon (HCT116) 21546810
chr12 52610459 52611030 ZNF143 GTRD no Epithelial (MCF-7) 21546811
chr12 52610465 52610999 TCF7L2 GTRD no Colon (HCT116) 21546812
chr12 52610499 52611032 ZNF143 GTRD no Epithelial (MCF-7) 21546813
chr12 52610532 52611436 ZNF143 GTRD no Epithelial (MCF-7) 21546814
chr12 52610843 52611393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546816
chr12 52610861 52610876 MEF2A JASPAR yes 120929301
chr12 52610863 52610875 MEF2A JASPAR yes 120929302
chr12 52610864 52610874 MEF2A JASPAR yes 120929303
chr12 52610865 52610876 FOXB1 JASPAR yes 120929305
chr12 52610866 52610877 FOXB1 JASPAR yes 120929306
chr12 52610867 52610875 FOXL1 JASPAR yes 120929307
chr12 52610867 52610878 FOXB1 JASPAR yes 120929308
chr12 52610868 52610879 FOXB1 JASPAR yes 120929309
chr12 52610869 52610877 FOXL1 JASPAR yes 120929310
chr12 52610871 52610879 FOXL1 JASPAR yes 120929311
chr12 52610872 52610883 FOXB1 JASPAR yes 120929312
Genes associated with rs116410174[chr12:52610874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More