EnhancerDB
  1. Home
  2. SNP
  3. rs116421585[chr1:204288983]
Enhancers that have rs116421585[chr1:204288983]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204280925 204295275 enh12578
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116421585[chr1:204288983]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204286232 204290079 ZNF274 GTRD no Bone Marrow (K562) 21370372
chr1 204286232 204290079 ZNF274 GTRD no Bone Marrow (K562) 107859825
chr1 204288629 204290004 ZNF274 GTRD no Bone Marrow (K562) 21370373
chr1 204288629 204290004 ZNF274 GTRD no Bone Marrow (K562) 107859826
chr1 204288963 204288984 ZNF263 JASPAR yes 34692170
chr1 204288972 204289894 ZNF274 GTRD no Bone Marrow (K562) 21370374
chr1 204288972 204289894 ZNF274 GTRD no Bone Marrow (K562) 107859827
chr1 204288978 204288984 SP1 TRANSFAC yes 34692171
chr1 204288979 204288984 SP1 TRANSFAC yes 34692172
chr1 204288980 204288985 SP1 TRANSFAC yes 34692173
chr1 204288980 204288989 THAP1 JASPAR yes 34692174
chr1 204288982 204289003 ZNF263 JASPAR yes 34692175
chr1 204288983 204288987 LFA1 TRANSFAC yes 34692176
Genes associated with rs116421585[chr1:204288983], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More