EnhancerDB
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  3. rs11642200[chr16:85450469]
Enhancers that have rs11642200[chr16:85450469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs11642200[chr16:85450469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85450449 85450469 RREB1 JASPAR yes 12058560
chr16 85450453 85450473 RREB1 JASPAR yes 12058562
chr16 85450455 85450470 FOXA1 JASPAR yes 12058563
chr16 85450456 85450471 FOXP1 JASPAR yes 12058565
chr16 85450456 85450476 RREB1 JASPAR yes 12058566
chr16 85450457 85450469 FOXC2 JASPAR yes 12058567
chr16 85450459 85450470 FOXA1 JASPAR yes 12058568
chr16 85450460 85450475 FOXP1 JASPAR yes 12058569
chr16 85450461 85450472 FOXP2 JASPAR yes 12058570
chr16 85450468 85450474 TCF4 TRANSFAC yes 12058571
chr16 85450468 85450483 FOXP1 JASPAR yes 12058572
Genes associated with rs11642200[chr16:85450469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More