EnhancerDB
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  3. rs116428828[chr1:231518016]
Enhancers that have rs116428828[chr1:231518016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116428828[chr1:231518016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231518009 231518019 NFIA JASPAR yes 36086837
chr1 231518010 231518019 NFIX JASPAR yes 36086838
chr1 231518011 231518017 NFIC JASPAR yes 36086839
Genes associated with rs116428828[chr1:231518016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More