EnhancerDB
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  3. rs116438212[chr6:35338329]
Enhancers that have rs116438212[chr6:35338329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 35337950 35338511 vista51711
VISTA
Transcript factors that have rs116438212[chr6:35338329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35338102 35338446 STAT3 UCSC Txn Factor no Conserved 108539851
chr6 35338144 35338554 FOSL2 UCSC Txn Factor no Conserved 108539852
chr6 35338151 35338433 CEBPB UCSC Txn Factor no Conserved 108539853
chr6 35338320 35338329 HIC2 JASPAR yes 70352586
chr6 35338320 35338329 HIC2 JASPAR yes 101277388
chr6 35338325 35338336 GCM1 JASPAR yes 70352588
chr6 35338325 35338336 GCM1 JASPAR yes 101277390
chr6 35338326 35338336 GCM2 JASPAR yes 70352589
chr6 35338326 35338336 GCM2 JASPAR yes 101277391
Genes associated with rs116438212[chr6:35338329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More