EnhancerDB
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  3. rs116449486[chr19:2556074]
Enhancers that have rs116449486[chr19:2556074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs116449486[chr19:2556074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2556072 2556084 TFAP2B JASPAR yes 112074299
chr19 2556072 2556084 TFAP2C JASPAR yes 112074300
chr19 2556072 2556087 TFAP2A JASPAR yes 112074301
chr19 2556073 2556084 TFAP2A JASPAR yes 112074302
chr19 2556073 2556084 TFAP2B JASPAR yes 112074303
chr19 2556073 2556084 TFAP2C JASPAR yes 112074304
chr19 2556074 2556083 TFAP2A JASPAR yes 112074305
Genes associated with rs116449486[chr19:2556074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More