EnhancerDB
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  3. rs116452354[chr1:22254558]
Enhancers that have rs116452354[chr1:22254558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116452354[chr1:22254558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22254544 22254558 BATF3 JASPAR yes 27333382
chr1 22254555 22254558 MYB TRANSFAC yes 27333383
chr1 22254555 22254574 CTCF JASPAR yes 27333384
chr1 22254558 22254571 ELF1 JASPAR yes 27333385
Genes associated with rs116452354[chr1:22254558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More