EnhancerDB
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  3. rs116468607[chr17:55504127]
Enhancers that have rs116468607[chr17:55504127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116468607[chr17:55504127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55504114 55504128 RXRB JASPAR yes 54954395
chr17 55504121 55504134 ZBTB18 JASPAR yes 54954396
chr17 55504122 55504136 SPI1 JASPAR yes 54954397
Genes associated with rs116468607[chr17:55504127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More