EnhancerDB
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  3. rs116472175[chr3:190064768]
Enhancers that have rs116472175[chr3:190064768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 190060801 190067455 enh21220
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Muscle (A673) Placenta Thyroid Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs116472175[chr3:190064768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 190064761 190064771 SP1 JASPAR yes 8645186
chr3 190064763 190064768 SP1 TRANSFAC yes 8645187
chr3 190064764 190064769 SP1 TRANSFAC yes 8645188
chr3 190064764 190064770 SP1 TRANSFAC yes 8645189
Genes associated with rs116472175[chr3:190064768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More