EnhancerDB
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  3. rs116478060[chr1:116896190]
Enhancers that have rs116478060[chr1:116896190]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs116478060[chr1:116896190]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116896184 116896194 EMX1 JASPAR yes 31799485
chr1 116896184 116896194 EVX1 JASPAR yes 31799486
chr1 116896184 116896194 EVX2 JASPAR yes 31799487
chr1 116896184 116896194 HOXA2 JASPAR yes 31799488
chr1 116896184 116896194 HOXB2 JASPAR yes 31799489
chr1 116896184 116896194 HOXB3 JASPAR yes 31799490
chr1 116896184 116896194 NOTO JASPAR yes 31799491
Genes associated with rs116478060[chr1:116896190], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More