EnhancerDB
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  3. rs116479207[chr6:12334539]
Enhancers that have rs116479207[chr6:12334539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116479207[chr6:12334539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12334536 12334557 IRF1 JASPAR yes 99962126
chr6 12334539 12334549 GABPA JASPAR yes 99962127
chr6 12334539 12334552 ELF1 JASPAR yes 99962128
chr6 12334539 12334553 SPI1 JASPAR yes 99962129
chr6 12334539 12334553 SPIC JASPAR yes 99962130
Genes associated with rs116479207[chr6:12334539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More