EnhancerDB
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  3. rs116484332[chr17:62697642]
Enhancers that have rs116484332[chr17:62697642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116484332[chr17:62697642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62695718 62697766 ZNF143 GTRD no Epithelial (MCF-7) 21779154
chr17 62695902 62698950 ZNF143 GTRD no Epithelial (MCF-7) 21779155
chr17 62696007 62697722 ZNF143 GTRD no Epithelial (MCF-7) 21779159
chr17 62697264 62697648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779167
chr17 62697369 62697986 ZNF143 GTRD no Epithelial (MCF-7) 21779170
chr17 62697413 62697683 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779171
chr17 62697633 62697648 MEF2C JASPAR yes 55313704
chr17 62697634 62697649 MEF2A JASPAR yes 55313705
chr17 62697635 62697647 MEF2A JASPAR yes 55313706
chr17 62697635 62697647 MEF2B JASPAR yes 55313707
chr17 62697635 62697647 MEF2D JASPAR yes 55313708
chr17 62697636 62697646 MEF2A JASPAR yes 55313709
Genes associated with rs116484332[chr17:62697642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More