EnhancerDB
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  3. rs116495537[chr17:76339507]
Enhancers that have rs116495537[chr17:76339507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116495537[chr17:76339507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76339186 76339542 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21793591
chr17 76339186 76339542 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108302093
chr17 76339223 76339533 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21793592
chr17 76339223 76339533 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108302094
chr17 76339268 76339524 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21793593
chr17 76339268 76339524 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108302095
chr17 76339507 76339522 STAT1 JASPAR yes 56150065
Genes associated with rs116495537[chr17:76339507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More