EnhancerDB
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  3. rs116496932[chr17:25860289]
Enhancers that have rs116496932[chr17:25860289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116496932[chr17:25860289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25860288 25860298 GSC2 JASPAR yes 53642179
chr17 25860288 25860298 GSC JASPAR yes 53642180
chr17 25860289 25860297 OTX1 JASPAR yes 53642181
chr17 25860289 25860297 OTX2 JASPAR yes 53642182
chr17 25860289 25860298 PITX3 JASPAR yes 53642183
Genes associated with rs116496932[chr17:25860289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More