EnhancerDB
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  3. rs116497001[chr1:19336291]
Enhancers that have rs116497001[chr1:19336291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116497001[chr1:19336291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19335395 19338715 ZNF274 GTRD no Blood (GM12878) 107802296
chr1 19335395 19338715 ZNF274 GTRD no Blood (GM12878) 107802297
chr1 19336275 19336294 CTCF JASPAR yes 27170688
chr1 19336282 19336295 JUN JASPAR yes 27170689
chr1 19336283 19336297 ATF7 JASPAR yes 27170690
chr1 19336284 19336296 JDP2 JASPAR yes 27170691
chr1 19336290 19336300 NEUROG2 JASPAR yes 27170692
Genes associated with rs116497001[chr1:19336291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More