EnhancerDB
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  3. rs116503559[chr12:52551391]
Enhancers that have rs116503559[chr12:52551391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116503559[chr12:52551391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52551132 52552068 ZNF143 GTRD no Epithelial (MCF-7) 21546529
chr12 52551133 52551759 ZNF143 GTRD no Epithelial (MCF-7) 21546530
chr12 52551241 52551991 ZNF143 GTRD no Epithelial (MCF-7) 21546531
chr12 52551267 52551985 ZNF143 GTRD no Epithelial (MCF-7) 21546532
chr12 52551379 52551391 TEAD1 JASPAR yes 120923390
chr12 52551385 52551401 GLIS1 JASPAR yes 120923391
Genes associated with rs116503559[chr12:52551391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More