EnhancerDB
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  3. rs116512126[chr2:38950067]
Enhancers that have rs116512126[chr2:38950067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 38949741 38950194 vista31126
VISTA
Transcript factors that have rs116512126[chr2:38950067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38949844 38950303 RELA UCSC Txn Factor no Conserved 108431912
chr2 38950057 38950072 RFX5 JASPAR yes 22038695
chr2 38950057 38950072 RFX5 JASPAR yes 73170168
chr2 38950062 38950073 TFAP2A JASPAR yes 22038697
chr2 38950062 38950073 TFAP2B JASPAR yes 22038698
chr2 38950062 38950073 TFAP2C JASPAR yes 22038699
chr2 38950062 38950073 TFAP2A JASPAR yes 73170170
chr2 38950062 38950073 TFAP2B JASPAR yes 73170171
chr2 38950062 38950073 TFAP2C JASPAR yes 73170172
chr2 38950063 38950072 TFAP2A JASPAR yes 22038700
chr2 38950063 38950072 TFAP2A JASPAR yes 73170173
Genes associated with rs116512126[chr2:38950067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More