EnhancerDB
  1. Home
  2. SNP
  3. rs116515774[chr1:27914406]
Enhancers that have rs116515774[chr1:27914406]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs116515774[chr1:27914406]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27914392 27914406 RXRB JASPAR yes 27712908
chr1 27914392 27914406 RXRG JASPAR yes 27712909
chr1 27914392 27914407 NR2C2 JASPAR yes 27712910
chr1 27914403 27914413 ALX3 JASPAR yes 27712912
chr1 27914404 27914412 LHX9 JASPAR yes 27712913
chr1 27914404 27914412 SHOX JASPAR yes 27712914
chr1 27914404 27914417 DUXA JASPAR yes 27712915
chr1 27914405 27914416 DUX4 JASPAR yes 27712916
chr1 27914405 27914416 PHOX2A JASPAR yes 27712917
Genes associated with rs116515774[chr1:27914406], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More