EnhancerDB
  1. Home
  2. SNP
  3. rs116518533[chr1:21593430]
Enhancers that have rs116518533[chr1:21593430]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116518533[chr1:21593430]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21593425 21593436 BATF JASPAR yes 27288860
chr1 21593428 21593443 SOX21 JASPAR yes 27288861
Genes associated with rs116518533[chr1:21593430], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More