EnhancerDB
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  3. rs11652408[chr17:49023088]
Enhancers that have rs11652408[chr17:49023088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11652408[chr17:49023088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49021219 49023142 ZNF274 GTRD no Liver (HepG2) 21771448
chr17 49021483 49023420 ZNF274 GTRD no Cervix (HeLa-S3) 21771463
chr17 49022121 49023288 TCF7L2 GTRD no Colon (HCT116) 21771559
chr17 49022133 49023105 ZNF274 GTRD no Liver (HepG2) 21771560
chr17 49022193 49023683 ZNF274 GTRD no Liver (HepG2) 21771564
chr17 49022367 49023393 ZNF274 GTRD no Bone Marrow (K562) 21771578
chr17 49022380 49023255 ZNF274 GTRD no Bone Marrow (K562) 21771580
chr17 49022400 49023091 ZNF143 GTRD no Epithelial (MCF-7) 21771582
chr17 49022416 49023108 ZNF274 GTRD no Liver (HepG2) 21771585
chr17 49022427 49023114 ZNF274 GTRD no Liver (HepG2) 21771586
chr17 49022514 49023109 ZNF274 GTRD no Cervix (HeLa-S3) 21771591
chr17 49023067 49023088 MAFG JASPAR yes 54737519
Genes associated with rs11652408[chr17:49023088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More