EnhancerDB
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Enhancers that have rs116527483[chr1:153482412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116527483[chr1:153482412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153482051 153482707 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21339454
chr1 153482212 153482582 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339455
chr1 153482241 153482551 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21339456
chr1 153482242 153482572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339457
chr1 153482250 153482586 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339458
chr1 153482260 153482530 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21339459
chr1 153482263 153482543 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339460
chr1 153482266 153482536 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339461
chr1 153482267 153482527 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339462
chr1 153482277 153482567 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339463
chr1 153482303 153482497 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21339464
chr1 153482310 153482471 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339465
chr1 153482317 153482487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339466
chr1 153482319 153482496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339467
chr1 153482323 153482506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339468
chr1 153482330 153482492 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21339469
chr1 153482349 153482439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339470
chr1 153482384 153482442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339471
chr1 153482395 153482414 CTCF JASPAR yes 32254748
chr1 153482404 153482415 NFKB1 JASPAR yes 32254752
Genes associated with rs116527483[chr1:153482412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More