EnhancerDB
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  3. rs116528668[chr1:206901352]
Enhancers that have rs116528668[chr1:206901352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116528668[chr1:206901352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206899540 206906636 ZNF274 GTRD no Blood (GM12878) 21372614
chr1 206901343 206901353 GSX1 JASPAR yes 34823112
chr1 206901344 206901352 NKX6-1 JASPAR yes 34823113
chr1 206901344 206901352 NKX6-2 JASPAR yes 34823114
chr1 206901344 206901354 POU6F2 JASPAR yes 34823115
chr1 206901350 206901370 TP63 JASPAR yes 34823116
chr1 206901351 206901369 TP53 JASPAR yes 34823117
Genes associated with rs116528668[chr1:206901352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More