EnhancerDB
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  3. rs116530435[chr17:1903849]
Enhancers that have rs116530435[chr17:1903849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116530435[chr17:1903849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1903838 1903856 IRF2 JASPAR yes 52715110
chr17 1903839 1903860 IRF1 JASPAR yes 52715111
chr17 1903841 1903856 PRDM1 JASPAR yes 52715112
chr17 1903841 1903856 STAT2 JASPAR yes 52715113
chr17 1903842 1903856 STAT1 JASPAR yes 52715114
chr17 1903843 1903855 IRF1 JASPAR yes 52715115
chr17 1903843 1903857 IRF7 JASPAR yes 52715116
chr17 1903843 1903858 IRF9 JASPAR yes 52715117
Genes associated with rs116530435[chr17:1903849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More