EnhancerDB
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  3. rs11653690[chr17:74442546]
Enhancers that have rs11653690[chr17:74442546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74401123 74447132 enh4607
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11653690[chr17:74442546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74442048 74444923 TCF7L2 GTRD no Colon (HCT116) 21788356
chr17 74442048 74444923 TCF7L2 GTRD no Colon (HCT116) 108295678
chr17 74442167 74445029 ZNF274 GTRD no Liver (HepG2) 21788357
chr17 74442167 74445029 ZNF274 GTRD no Liver (HepG2) 108295679
chr17 74442194 74445016 TCF7L2 GTRD no Colon (HCT116) 21788358
chr17 74442194 74445016 TCF7L2 GTRD no Colon (HCT116) 108295680
chr17 74442200 74444988 TCF7L2 GTRD no Colon (HCT116) 21788359
chr17 74442200 74444988 TCF7L2 GTRD no Colon (HCT116) 108295681
chr17 74442201 74445167 ZNF274 GTRD no Cervix (HeLa-S3) 21788360
chr17 74442201 74445167 ZNF274 GTRD no Cervix (HeLa-S3) 108295682
chr17 74442225 74444436 ZNF274 GTRD no Liver (HepG2) 21788361
chr17 74442225 74444436 ZNF274 GTRD no Liver (HepG2) 108295683
chr17 74442249 74445039 ZNF274 GTRD no Liver (HepG2) 21788362
chr17 74442249 74445039 ZNF274 GTRD no Liver (HepG2) 108295684
chr17 74442531 74442551 RREB1 JASPAR yes 56001623
chr17 74442533 74442548 FOXP1 JASPAR yes 56001624
chr17 74442534 74442549 FOXA1 JASPAR yes 56001626
chr17 74442534 74442555 IRF1 JASPAR yes 56001627
chr17 74442535 74442547 FOXC2 JASPAR yes 56001628
chr17 74442536 74442548 FOXI1 JASPAR yes 56001629
chr17 74442536 74442556 RREB1 JASPAR yes 56001630
chr17 74442539 74442560 IRF1 JASPAR yes 56001631
chr17 74442540 74442555 FOXP1 JASPAR yes 56001632
chr17 74442540 74442560 RREB1 JASPAR yes 56001633
chr17 74442540 74442561 IRF1 JASPAR yes 56001634
chr17 74442544 74442559 STAT2 JASPAR yes 56001635
Genes associated with rs11653690[chr17:74442546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More