EnhancerDB
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  3. rs11653728[chr17:48936239]
Enhancers that have rs11653728[chr17:48936239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs11653728[chr17:48936239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48936233 48936243 ALX3 JASPAR yes 54726451
chr17 48936233 48936243 GSX2 JASPAR yes 54726452
chr17 48936233 48936243 MIXL1 JASPAR yes 54726453
chr17 48936234 48936242 ISX JASPAR yes 54726454
chr17 48936234 48936242 LHX9 JASPAR yes 54726455
chr17 48936234 48936242 LMX1B JASPAR yes 54726456
chr17 48936234 48936242 PRRX1 JASPAR yes 54726457
chr17 48936234 48936242 RAX2 JASPAR yes 54726458
chr17 48936234 48936242 SHOX JASPAR yes 54726459
chr17 48936234 48936242 UNCX JASPAR yes 54726460
Genes associated with rs11653728[chr17:48936239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More