EnhancerDB
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  3. rs116540782[chr12:125381769]
Enhancers that have rs116540782[chr12:125381769]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116540782[chr12:125381769]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125380477 125382882 ZNF274 GTRD no Bone Marrow (K562) 21583218
chr12 125380847 125381830 ZNF274 GTRD no Blood (GM12878) 21583220
chr12 125381063 125382115 ZNF274 GTRD no Liver (HepG2) 21583222
chr12 125381090 125382009 ZNF274 GTRD no Blood (GM12878) 21583225
chr12 125381162 125382071 ZNF274 GTRD no Cervix (HeLa-S3) 21583226
chr12 125381172 125382073 ZNF274 GTRD no Bone Marrow (K562) 21583227
chr12 125381207 125382016 ZNF274 GTRD no Bone Marrow (K562) 21583228
chr12 125381215 125381965 ZNF274 GTRD no Liver (HepG2) 21583229
chr12 125381257 125381949 ZNF274 GTRD no Blood (GM12878) 21583230
chr12 125381265 125382073 ZNF143 GTRD no Epithelial (MCF-7) 21583231
chr12 125381305 125381845 ZBTB33 GTRD no Brain (SK-N-SH) 21583232
chr12 125381387 125381831 ZNF274 GTRD no Blood (GM12878) 21583233
chr12 125381446 125381781 ZBTB33 GTRD no Brain (SK-N-SH) 21583234
chr12 125381471 125381853 ZNF274 GTRD no Liver (HepG2) 21583235
chr12 125381758 125381775 PAX9 JASPAR yes 124430703
chr12 125381761 125381773 PBX1 JASPAR yes 124430704
chr12 125381765 125381843 ZNF274 GTRD no Bone Marrow (K562) 21583237
chr12 125381769 125381774 MYB TRANSFAC yes 124430705
Genes associated with rs116540782[chr12:125381769], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More