EnhancerDB
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  3. rs116543468[chr1:2168639]
Enhancers that have rs116543468[chr1:2168639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116543468[chr1:2168639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2168620 2168640 ESR1 JASPAR yes 26225137
chr1 2168627 2168642 JUND JASPAR yes 26225138
chr1 2168628 2168641 JUN JASPAR yes 26225139
chr1 2168635 2168647 EHF JASPAR yes 26225141
chr1 2168635 2168647 ELF4 JASPAR yes 26225142
chr1 2168635 2168648 ELF3 JASPAR yes 26225143
chr1 2168636 2168647 ELF5 JASPAR yes 26225144
chr1 2168639 2168644 ETS2 TRANSFAC yes 26225145
Genes associated with rs116543468[chr1:2168639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More