EnhancerDB
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  3. rs11654508[chr17:78771947]
Enhancers that have rs11654508[chr17:78771947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs11654508[chr17:78771947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78771934 78771947 SMAD2 JASPAR yes 56281159
chr17 78771944 78771948 H1TF2 TRANSFAC yes 56281162
chr17 78771944 78771948 NFE TRANSFAC yes 56281163
chr17 78771944 78771948 SRF TRANSFAC yes 56281164
chr17 78771947 78771962 TFAP2A JASPAR yes 56281165
chr17 78771947 78771962 TFAP2C JASPAR yes 56281166
Genes associated with rs11654508[chr17:78771947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More