EnhancerDB
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  3. rs116550502[chr17:56073946]
Enhancers that have rs116550502[chr17:56073946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116550502[chr17:56073946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56073933 56073953 PPARG JASPAR yes 55005067
chr17 56073935 56073950 ESR2 JASPAR yes 55005068
chr17 56073946 56073956 TCF3 JASPAR yes 55005070
Genes associated with rs116550502[chr17:56073946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More