EnhancerDB
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  3. rs116566269[chr6:35571791]
Enhancers that have rs116566269[chr6:35571791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116566269[chr6:35571791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35571782 35571792 HOXA13 JASPAR yes 101294437
chr6 35571783 35571794 CDX2 JASPAR yes 101294438
chr6 35571784 35571798 ONECUT2 JASPAR yes 101294439
chr6 35571784 35571798 ONECUT3 JASPAR yes 101294440
chr6 35571785 35571805 RREB1 JASPAR yes 101294441
chr6 35571785 35571806 IRF1 JASPAR yes 101294442
chr6 35571787 35571796 SRY JASPAR yes 101294443
chr6 35571790 35571802 IRF1 JASPAR yes 101294444
chr6 35571790 35571810 RREB1 JASPAR yes 101294445
Genes associated with rs116566269[chr6:35571791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More