EnhancerDB
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  3. rs116590976[chr17:38671681]
Enhancers that have rs116590976[chr17:38671681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116590976[chr17:38671681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38670919 38671693 TCF7L2 GTRD no Colon (HCT116) 21754343
chr17 38670984 38671749 TCF7L2 GTRD no Colon (HCT116) 21754344
chr17 38670996 38672332 TCF7L2 GTRD no Colon (HCT116) 21754345
chr17 38671043 38673614 ZNF274 GTRD no Bone Marrow (K562) 21754346
chr17 38671062 38671746 TCF7L2 GTRD no Colon (HCT116) 21754348
chr17 38671193 38673444 ZNF274 GTRD no Liver (HepG2) 21754351
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 21754352
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 108255234
chr17 38671278 38673420 ZNF274 GTRD no Liver (HepG2) 21754353
chr17 38671378 38672493 ZNF274 GTRD no Liver (HepG2) 21754354
chr17 38671433 38672427 ZNF274 GTRD no Bone Marrow (K562) 21754356
chr17 38671503 38672250 ZNF274 GTRD no Liver (HepG2) 21754357
chr17 38671569 38672314 ZNF274 GTRD no Bone Marrow (K562) 21754358
chr17 38671606 38672080 ZNF274 GTRD no Bone Marrow (K562) 21754359
chr17 38671651 38672255 ZNF274 GTRD no Bone Marrow (K562) 21754360
chr17 38671655 38672944 TCF7L2 GTRD no Colon (HCT116) 21754361
chr17 38671659 38672336 ZNF274 GTRD no Liver (HepG2) 21754362
chr17 38671661 38671682 ZNF263 JASPAR yes 54220012
chr17 38671664 38672245 ZNF274 GTRD no Cervix (HeLa-S3) 21754363
chr17 38671671 38675578 ZNF274 GTRD no Liver (HepG2) 21754364
chr17 38671671 38675578 ZNF274 GTRD no Liver (HepG2) 108255235
chr17 38671674 38672109 ZNF274 GTRD no Cervix (HeLa-S3) 21754365
chr17 38671674 38672179 ZNF274 GTRD no Liver (HepG2) 21754366
chr17 38671675 38672336 ZNF274 GTRD no Liver (HepG2) 21754367
chr17 38671676 38671697 IRF1 JASPAR yes 54220013
chr17 38671679 38673177 ZNF274 GTRD no Liver (HepG2) 21754368
Genes associated with rs116590976[chr17:38671681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More