EnhancerDB
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  3. rs116605840[chr1:9359523]
Enhancers that have rs116605840[chr1:9359523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9355785 9365653 enh11482
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116605840[chr1:9359523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9359515 9359529 XBP1 JASPAR yes 26635761
chr1 9359516 9359530 ATF7 JASPAR yes 26635762
chr1 9359516 9359530 BATF3 JASPAR yes 26635763
chr1 9359516 9359530 CREB3 JASPAR yes 26635764
chr1 9359517 9359529 PROX1 JASPAR yes 26635765
chr1 9359519 9359527 CREB1 JASPAR yes 26635766
chr1 9359521 9359526 ATF1 TRANSFAC yes 26635767
Genes associated with rs116605840[chr1:9359523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More