EnhancerDB
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  3. rs116612052[chr2:235583304]
Enhancers that have rs116612052[chr2:235583304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235581405 235605475 enh19346
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116612052[chr2:235583304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235583299 235583317 SRF JASPAR yes 81896917
chr2 235583301 235583312 CDX2 JASPAR yes 81896918
chr2 235583302 235583313 HOXA10 JASPAR yes 81896919
chr2 235583302 235583313 HOXC11 JASPAR yes 81896920
chr2 235583302 235583313 HOXC12 JASPAR yes 81896921
chr2 235583302 235583313 HOXC13 JASPAR yes 81896922
chr2 235583302 235583313 HOXD12 JASPAR yes 81896923
chr2 235583303 235583312 CDX1 JASPAR yes 81896924
chr2 235583303 235583313 HOXA13 JASPAR yes 81896925
chr2 235583303 235583313 HOXC10 JASPAR yes 81896926
chr2 235583303 235583313 HOXD11 JASPAR yes 81896927
chr2 235583303 235583313 HOXD13 JASPAR yes 81896928
Genes associated with rs116612052[chr2:235583304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More