EnhancerDB
  1. Home
  2. SNP
  3. rs116620201[chr1:2179995]
Enhancers that have rs116620201[chr1:2179995]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116620201[chr1:2179995]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2175546 2181036 ZNF274 GTRD no Bone Marrow (K562) 107801815
chr1 2179992 2179997 SP1 TRANSFAC yes 26226638
chr1 2179992 2179998 SP1 TRANSFAC yes 26226639
chr1 2179995 2180000 SP1 TRANSFAC yes 26226640
Genes associated with rs116620201[chr1:2179995], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More