EnhancerDB
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  3. rs116630306[chr17:59403176]
Enhancers that have rs116630306[chr17:59403176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116630306[chr17:59403176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59403170 59403184 FOXF2 JASPAR yes 55148709
chr17 59403170 59403185 FOXP1 JASPAR yes 55148710
chr17 59403171 59403182 FOXA1 JASPAR yes 55148711
chr17 59403171 59403186 FOXA1 JASPAR yes 55148712
chr17 59403173 59403181 GATA3 JASPAR yes 55148713
chr17 59403173 59403184 FOXP2 JASPAR yes 55148714
Genes associated with rs116630306[chr17:59403176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More