EnhancerDB
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  3. rs116633240[chr5:90595782]
Enhancers that have rs116633240[chr5:90595782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116633240[chr5:90595782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90595771 90595784 ELF1 JASPAR yes 64189663
chr5 90595780 90595784 YY1 TRANSFAC yes 64189666
chr5 90595781 90595791 HOXA13 JASPAR yes 64189667
chr5 90595781 90595791 HOXB13 JASPAR yes 64189668
chr5 90595781 90595791 HOXD13 JASPAR yes 64189669
chr5 90595781 90595792 HOXA10 JASPAR yes 64189670
chr5 90595782 90595791 CDX1 JASPAR yes 64189671
chr5 90595782 90595793 CDX2 JASPAR yes 64189672
Genes associated with rs116633240[chr5:90595782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More