EnhancerDB
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  3. rs116641325[chr1:223908736]
Enhancers that have rs116641325[chr1:223908736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116641325[chr1:223908736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223908731 223908752 REST JASPAR yes 35672343
chr1 223908732 223908747 FOXA1 JASPAR yes 35672344
chr1 223908733 223908748 FOXP1 JASPAR yes 35672345
chr1 223908734 223908745 FOXP2 JASPAR yes 35672346
chr1 223908734 223908748 FOXF2 JASPAR yes 35672347
chr1 223908735 223908743 FOXD1 JASPAR yes 35672348
chr1 223908735 223908743 FOXO3 JASPAR yes 35672349
chr1 223908736 223908743 FOXD2 JASPAR yes 35672350
chr1 223908736 223908743 FOXI1 JASPAR yes 35672351
chr1 223908736 223908743 FOXL1 JASPAR yes 35672352
chr1 223908736 223908743 FOXO4 JASPAR yes 35672353
chr1 223908736 223908743 FOXO6 JASPAR yes 35672354
chr1 223908736 223908743 FOXP3 JASPAR yes 35672355
chr1 223908736 223908747 FOXA1 JASPAR yes 35672356
Genes associated with rs116641325[chr1:223908736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More