EnhancerDB
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  3. rs116654329[chr1:171787850]
Enhancers that have rs116654329[chr1:171787850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171784505 171789435 enh12369
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Placenta Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116654329[chr1:171787850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171787586 171788081 ZNF143 GTRD no Epithelial (MCF-7) 21349786
chr1 171787662 171788033 ZNF143 GTRD no Epithelial (MCF-7) 21349787
chr1 171787665 171788045 ZNF143 GTRD no Epithelial (MCF-7) 21349788
chr1 171787693 171788078 ZNF143 GTRD no Epithelial (MCF-7) 21349789
chr1 171787834 171787855 IRF1 JASPAR yes 33093809
chr1 171787838 171787852 IRF8 JASPAR yes 33093810
Genes associated with rs116654329[chr1:171787850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More