EnhancerDB
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  3. rs116658608[chr1:201431872]
Enhancers that have rs116658608[chr1:201431872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116658608[chr1:201431872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201428969 201431998 ZNF143 GTRD no Epithelial (MCF-7) 21364083
chr1 201428969 201431998 ZNF143 GTRD no Epithelial (MCF-7) 107856210
chr1 201430736 201431969 ZNF143 GTRD no Epithelial (MCF-7) 21364137
chr1 201430736 201431969 ZNF143 GTRD no Epithelial (MCF-7) 107856221
chr1 201431324 201431971 ZNF143 GTRD no Epithelial (MCF-7) 21364180
chr1 201431857 201431878 IRF1 JASPAR yes 34496488
chr1 201431861 201431876 STAT2 JASPAR yes 34496489
chr1 201431862 201431874 IRF1 JASPAR yes 34496490
chr1 201431862 201431877 FOXP1 JASPAR yes 34496491
chr1 201431862 201431883 IRF1 JASPAR yes 34496492
chr1 201431864 201431884 RREB1 JASPAR yes 34496493
chr1 201431867 201431879 IRF1 JASPAR yes 34496494
chr1 201431867 201431882 FOXP1 JASPAR yes 34496495
chr1 201431869 201431889 RREB1 JASPAR yes 34496496
chr1 201431871 201431886 FOXP1 JASPAR yes 34496497
chr1 201431872 201431883 FOXA1 JASPAR yes 34496498
chr1 201431872 201431887 FOXA1 JASPAR yes 34496499
Genes associated with rs116658608[chr1:201431872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More