EnhancerDB
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  3. rs116663258[chr17:38709203]
Enhancers that have rs116663258[chr17:38709203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38708057 38709216 vista24738
VISTA
Transcript factors that have rs116663258[chr17:38709203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38708220 38710000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756078
chr17 38708220 38710000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256656
chr17 38708261 38709409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756079
chr17 38708261 38709409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256657
chr17 38708310 38709262 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756084
chr17 38708310 38709262 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256664
chr17 38708707 38709391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756098
chr17 38708707 38709391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256684
chr17 38708707 38709463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756099
chr17 38708707 38709463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256685
chr17 38708838 38709218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756103
chr17 38708838 38709218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256689
chr17 38708859 38709295 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756104
chr17 38708859 38709295 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256690
chr17 38708884 38710263 ZBTB33 GTRD no Lung (A549) 108256691
chr17 38709029 38711415 ZNF274 GTRD no Liver (HepG2) 21756106
chr17 38709029 38711415 ZNF274 GTRD no Liver (HepG2) 108256693
chr17 38709053 38709708 ZNF143 GTRD no Epithelial (MCF-7) 21756107
chr17 38709053 38709708 ZNF143 GTRD no Epithelial (MCF-7) 108256694
chr17 38709058 38709271 ZNF274 GTRD no Bone Marrow (K562) 21756108
chr17 38709058 38709271 ZNF274 GTRD no Bone Marrow (K562) 108256695
chr17 38709098 38709462 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756109
chr17 38709098 38709462 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256696
chr17 38709099 38709884 ZNF274 GTRD no Blood (GM12878) 21756110
chr17 38709099 38709884 ZNF274 GTRD no Blood (GM12878) 108256697
chr17 38709190 38709210 TP63 JASPAR yes 21236150
chr17 38709190 38709210 TP63 JASPAR yes 54225610
chr17 38709194 38709205 E2F6 JASPAR yes 21236151
chr17 38709194 38709205 E2F6 JASPAR yes 54225611
chr17 38709202 38709212 HMBOX1 JASPAR yes 21236152
chr17 38709202 38709212 HMBOX1 JASPAR yes 54225612
Genes associated with rs116663258[chr17:38709203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More