EnhancerDB
  1. Home
  2. SNP
  3. rs116683624[chr17:78760552]
Enhancers that have rs116683624[chr17:78760552]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs116683624[chr17:78760552]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78760551 78760565 RXRB JASPAR yes 56279441
chr17 78760551 78760565 RXRG JASPAR yes 56279442
Genes associated with rs116683624[chr17:78760552], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More