EnhancerDB
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  3. rs116688840[chr6:11268657]
Enhancers that have rs116688840[chr6:11268657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs116688840[chr6:11268657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11268646 11268657 FOXA1 JASPAR yes 99871025
chr6 11268653 11268663 HOXC10 JASPAR yes 99871026
chr6 11268653 11268663 HOXD11 JASPAR yes 99871027
Genes associated with rs116688840[chr6:11268657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More