EnhancerDB
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  3. rs116688945[chr5:148283917]
Enhancers that have rs116688945[chr5:148283917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs116688945[chr5:148283917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148283913 148283924 CDX2 JASPAR yes 66771766
chr5 148283914 148283925 HOXA10 JASPAR yes 66771767
chr5 148283915 148283924 CDX1 JASPAR yes 66771768
Genes associated with rs116688945[chr5:148283917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More