EnhancerDB
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  3. rs11669339[chr19:10836601]
Enhancers that have rs11669339[chr19:10836601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11669339[chr19:10836601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10836591 10836601 ALX3 JASPAR yes 112431907
chr19 10836591 10836601 EMX1 JASPAR yes 112431908
chr19 10836591 10836601 EMX2 JASPAR yes 112431909
chr19 10836591 10836601 EVX1 JASPAR yes 112431910
chr19 10836591 10836601 EVX2 JASPAR yes 112431911
chr19 10836591 10836601 GSX1 JASPAR yes 112431912
chr19 10836591 10836601 GSX2 JASPAR yes 112431913
chr19 10836591 10836601 HOXA2 JASPAR yes 112431914
chr19 10836591 10836601 HOXB2 JASPAR yes 112431915
chr19 10836591 10836601 HOXB3 JASPAR yes 112431916
chr19 10836591 10836601 LHX2 JASPAR yes 112431917
chr19 10836591 10836601 MEOX1 JASPAR yes 112431918
chr19 10836591 10836601 MEOX2 JASPAR yes 112431919
chr19 10836591 10836601 MIXL1 JASPAR yes 112431920
chr19 10836591 10836601 NOTO JASPAR yes 112431921
chr19 10836593 10836604 NFIL3 JASPAR yes 112431931
Genes associated with rs11669339[chr19:10836601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More