EnhancerDB
  1. Home
  2. SNP
  3. rs116714609[chr2:38920957]
Enhancers that have rs116714609[chr2:38920957]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116714609[chr2:38920957]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38920948 38920961 EOMES JASPAR yes 73165506
chr2 38920950 38920960 TBR1 JASPAR yes 73165507
chr2 38920950 38920961 TBX20 JASPAR yes 73165508
chr2 38920950 38920961 TBX2 JASPAR yes 73165509
chr2 38920951 38920961 TBX21 JASPAR yes 73165510
chr2 38920952 38920960 MGA JASPAR yes 73165511
Genes associated with rs116714609[chr2:38920957], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More