EnhancerDB
  1. Home
  2. SNP
  3. rs116715409[chr2:27955673]
Enhancers that have rs116715409[chr2:27955673]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116715409[chr2:27955673]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27955662 27955675 ATF4 JASPAR yes 72586646
chr2 27955665 27955676 PHOX2A JASPAR yes 72586647
chr2 27955665 27955676 PROP1 JASPAR yes 72586648
Genes associated with rs116715409[chr2:27955673], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More