EnhancerDB
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  3. rs116720649[chr2:28933414]
Enhancers that have rs116720649[chr2:28933414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116720649[chr2:28933414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28933397 28933418 IRF1 JASPAR yes 72672148
chr2 28933400 28933414 IRF8 JASPAR yes 72672149
chr2 28933401 28933415 STAT1 JASPAR yes 72672150
chr2 28933401 28933416 STAT2 JASPAR yes 72672151
chr2 28933409 28933424 MEF2C JASPAR yes 72672152
chr2 28933414 28933425 FOXH1 JASPAR yes 72672153
Genes associated with rs116720649[chr2:28933414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More