EnhancerDB
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  3. rs116728227[chr1:153501867]
Enhancers that have rs116728227[chr1:153501867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116728227[chr1:153501867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153501854 153501870 SOX8 JASPAR yes 32257776
chr1 153501858 153501870 BHLHE23 JASPAR yes 32257779
chr1 153501859 153501869 BHLHE22 JASPAR yes 32257780
chr1 153501859 153501869 NEUROD2 JASPAR yes 32257781
chr1 153501859 153501869 OLIG1 JASPAR yes 32257782
chr1 153501859 153501869 OLIG2 JASPAR yes 32257783
chr1 153501859 153501869 OLIG3 JASPAR yes 32257784
chr1 153501859 153501871 TAL1 JASPAR yes 32257785
Genes associated with rs116728227[chr1:153501867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More