EnhancerDB
  1. Home
  2. SNP
  3. rs116729463[chr1:27466323]
Enhancers that have rs116729463[chr1:27466323]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116729463[chr1:27466323]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27466305 27466323 IRF2 JASPAR yes 27680849
chr1 27466309 27466323 STAT1 JASPAR yes 27680850
chr1 27466310 27466324 IRF8 JASPAR yes 27680851
Genes associated with rs116729463[chr1:27466323], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More